UCSC Genome Browser REST API — Hubs

naftiko: 1.0.0-alpha2
info:
  label: UCSC Genome Browser REST API — Hubs
  description: 'UCSC Genome Browser REST API — Hubs. 2 operations. Lead operation: List Hub Genomes. Self-contained Naftiko
    capability covering one Ucsc Genomic Data business surface.'
  tags:
  - Ucsc Genomic Data
  - Hubs
  created: '2026-05-19'
  modified: '2026-05-19'
binds:
- namespace: env
  keys:
    UCSC_GENOMIC_DATA_API_KEY: UCSC_GENOMIC_DATA_API_KEY
capability:
  consumes:
  - type: http
    namespace: ucsc-genomic-data-hubs
    baseUri: https://api.genome.ucsc.edu
    description: UCSC Genome Browser REST API — Hubs business capability. Self-contained, no shared references.
    resources:
    - name: list-hubGenomes
      path: /list/hubGenomes
      operations:
      - name: listhubgenomes
        method: GET
        description: List Hub Genomes
        outputRawFormat: json
        outputParameters:
        - name: result
          type: object
          value: $.
        inputParameters:
        - name: hubUrl
          in: query
          type: string
          description: URL of the hub.txt file for the track hub.
          required: true
    - name: list-publicHubs
      path: /list/publicHubs
      operations:
      - name: listpublichubs
        method: GET
        description: List Public Hubs
        outputRawFormat: json
        outputParameters:
        - name: result
          type: object
          value: $.
  exposes:
  - type: rest
    namespace: ucsc-genomic-data-hubs-rest
    port: 8080
    description: REST adapter for UCSC Genome Browser REST API — Hubs. One Spectral-compliant resource per consumed operation,
      prefixed with /v1.
    resources:
    - path: /v1/list/hubgenomes
      name: list-hubgenomes
      description: REST surface for list-hubGenomes.
      operations:
      - method: GET
        name: listhubgenomes
        description: List Hub Genomes
        call: ucsc-genomic-data-hubs.listhubgenomes
        with:
          hubUrl: rest.hubUrl
        outputParameters:
        - type: object
          mapping: $.
    - path: /v1/list/publichubs
      name: list-publichubs
      description: REST surface for list-publicHubs.
      operations:
      - method: GET
        name: listpublichubs
        description: List Public Hubs
        call: ucsc-genomic-data-hubs.listpublichubs
        outputParameters:
        - type: object
          mapping: $.
  - type: mcp
    namespace: ucsc-genomic-data-hubs-mcp
    port: 9090
    transport: http
    description: MCP adapter for UCSC Genome Browser REST API — Hubs. One tool per consumed operation, routed inline through
      this capability's consumes block.
    tools:
    - name: list-hub-genomes
      description: List Hub Genomes
      hints:
        readOnly: true
        destructive: false
        idempotent: true
      call: ucsc-genomic-data-hubs.listhubgenomes
      with:
        hubUrl: tools.hubUrl
      outputParameters:
      - type: object
        mapping: $.
    - name: list-public-hubs
      description: List Public Hubs
      hints:
        readOnly: true
        destructive: false
        idempotent: true
      call: ucsc-genomic-data-hubs.listpublichubs
      outputParameters:
      - type: object
        mapping: $.